M. mulatta Gene: POPDC3 - ENSMMUG00000014473 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000014473
NamePOPDC3
Descriptionpopeye domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17649]
OrganismMacaca mulatta (macaque)
Synonym(s)ba355m14.1, mgc22671, pop3
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
  • 2.44e3
95.62
  • 95.62
  • 91.11
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
95.13
  • 95.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
2.62e3
  • 2.62e3
  • 3.29e3
  • 3.90e3
90.46
  • 90.46
  • 88.02
  • 85.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
4.63e3
  • 4.63e3
83.17
  • 83.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
8.15e3
  • 8.15e3
  • 9.55e3
  • 1.50e4
70.34
  • 70.34
  • 65.24
  • 45.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
9.39e3
  • 9.39e3
65.84
  • 65.84
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
9.76e3
  • 9.76e3
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
9.91e3
  • 9.91e3
63.95
  • 63.95
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.25e4
57.94
  • 57.94
  • 54.45
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
57.55
  • 57.55
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.69e4
54.28
  • 54.28
  • 38.61
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.40e4
54.03
  • 54.03
  • 49.09
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
1.34e4
  • 1.34e4
  • 1.55e4
  • 1.69e4
51.30
  • 51.30
  • 43.63
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.83e4
  • 1.84e4
48.88
  • 48.88
  • 33.40
  • 33.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
48.34
  • 48.34
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
47.46
  • 47.46
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
45.26
  • 45.26
AEIR
  • AEIR
UBERON:0002107liver
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.88e4
  • 1.93e4
44.95
  • 44.95
  • 31.47
  • 29.83
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
44.60
  • 44.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
41.67
  • 41.67
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
39.30
  • 39.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000014473.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSMMUG00000014473.

Cross-references

EnsemblENSMMUG00000014473 (POPDC3)
HGNCHGNC:17649 (POPDC3)
EMBLCM001256, JU335885
Uniprot/SPTREMBLF7GJR7, F7GJR7_MACMU

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