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M. mulatta Gene: COL10A1 - ENSMMUG00000014642 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000014642
NameCOL10A1
Descriptioncollagen, type X, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2185]
OrganismMacaca mulatta (macaque)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
  • 1.86e4
38.80
  • 38.80
  • 32.19
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.81e4
  • 1.81e4
34.28
  • 34.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.81e4
  • 1.81e4
  • 2.13e4
33.97
  • 33.97
  • 22.45
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
  • 1.83e4
33.67
  • 33.67
  • 33.47
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.89e4
  • 1.89e4
  • 2.07e4
31.33
  • 31.33
  • 24.82
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.96e4
  • 1.96e4
  • 2.53e4
28.75
  • 28.75
  • 7.88
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.98e4
  • 1.98e4
28.11
  • 28.11
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.98e4
  • 1.98e4
28.09
  • 28.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000014642.

Cross-references

EnsemblENSMMUG00000014642 (COL10A1)
HGNCHGNC:2185 (COL10A1)
Uniprot/SPTREMBLF7G2A9, F7G2A9_MACMU

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