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M. mulatta Gene: CLCF1 - ENSMMUG00000017274 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000017274
NameCLCF1
Descriptioncardiotrophin-like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]
OrganismMacaca mulatta (macaque)
Synonym(s)bsf-3, bsf3, ciss2, clc, nnt-1, nnt1, nr6
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
6.10e3
  • 6.10e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.10e3
  • 6.10e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
73.43
  • 73.43
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.82e3
  • 7.82e3
71.56
  • 71.56
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.58e4
60.71
  • 60.71
  • 42.62
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.34e4
58.07
  • 58.07
  • 51.35
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 1.29e4
55.79
  • 55.79
  • 53.24
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
50.53
  • 50.53
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.48e4
50.52
  • 50.52
  • 46.01
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
48.39
  • 48.39
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
47.88
  • 47.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
1.43e4
  • 1.43e4
  • 1.44e4
  • 1.69e4
47.80
  • 47.80
  • 47.75
  • 38.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
46.52
  • 46.52
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
46.29
  • 46.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.79e4
46.24
  • 46.24
  • 46.19
  • 34.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 2.07e4
44.81
  • 44.81
  • 24.82
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
  • 1.82e4
43.96
  • 43.96
  • 33.84
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
43.62
  • 43.62
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
40.99
  • 40.99
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
40.06
  • 40.06
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
  • 1.72e4
  • 1.96e4
39.62
  • 39.62
  • 37.57
  • 28.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
  • 1.82e4
38.51
  • 38.51
  • 33.88
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
1.70e4
  • 1.70e4
38.32
  • 38.32
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
38.29
  • 38.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000017274.

Cross-references

EnsemblENSMMUG00000017274 (CLCF1)
HGNCHGNC:17412 (CLCF1)
Uniprot/SPTREMBLF7GWR7, F7GWR7_MACMU

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