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M. mulatta Gene: DEPDC1B - ENSMMUG00000018379 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000018379
NameDEPDC1B
DescriptionDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]
OrganismMacaca mulatta (macaque)
Synonym(s)brcc3, xtp1
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.37e3
  • 6.37e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
6.52e3
  • 6.52e3
76.27
  • 76.27
AEIR
  • AEIR
UBERON:0000473testis
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.91e3
  • 7.91e3
  • 1.03e4
  • 1.25e4
71.21
  • 71.21
  • 62.34
  • 54.56
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
9.80e3
  • 9.80e3
64.34
  • 64.34
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.83e3
  • 9.83e3
64.25
  • 64.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.48e4
48.81
  • 48.81
  • 46.01
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
45.19
  • 45.19
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
41.12
  • 41.12
AEIR
  • AEIR
UBERON:0002107liver
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.70e4
  • 2.00e4
40.84
  • 40.84
  • 38.20
  • 27.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
39.01
  • 39.01
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
  • 1.95e4
38.86
  • 38.86
  • 29.15
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
38.42
  • 38.42
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
  • 1.76e4
  • 2.10e4
38.33
  • 38.33
  • 35.88
  • 23.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
34.38
  • 34.38
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.81e4
  • 1.81e4
34.04
  • 34.04
AEIR
  • AEIR
UBERON:0000948heart
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 2.38e4
33.20
  • 33.20
  • 13.36
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
1.89e4
  • 1.89e4
31.38
  • 31.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000018379.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSMMUG00000018379.

Cross-references

EnsemblENSMMUG00000018379 (DEPDC1B)
HGNCHGNC:24902 (DEPDC1B)
EMBLCM001258, JU476375
Uniprot/SPTREMBLF7H1C3, F7H1C3_MACMU

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