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M. mulatta Gene: SLC18A1 - ENSMMUG00000019999 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000019999
NameSLC18A1
Descriptionsolute carrier family 18 (vesicular monoamine transporter), member 1 [Source:HGNC Symbol;Acc:HGNC:10934]
OrganismMacaca mulatta (macaque)
Synonym(s)cgat, vat1, vmat1
Orthologs(s)26 orthologs
Paralog(s)24 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
60.93
  • 60.93
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
55.56
  • 55.56
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
51.74
  • 51.74
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
49.77
  • 49.77
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
48.19
  • 48.19
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.87e4
47.52
  • 47.52
  • 31.99
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
46.59
  • 46.59
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
45.99
  • 45.99
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
1.56e4
  • 1.56e4
  • 1.58e4
  • 1.69e4
43.38
  • 43.38
  • 42.53
  • 38.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
1.66e4
  • 1.66e4
  • 1.66e4
  • 1.82e4
39.77
  • 39.77
  • 39.64
  • 33.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
35.49
  • 35.49
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
33.13
  • 33.13
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.13e4
  • 2.13e4
22.54
  • 22.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species26 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000019999.

Paralogs (same species)

Cross-references

EnsemblENSMMUG00000019999 (SLC18A1)
HGNCHGNC:10934 (SLC18A1)
Uniprot/SPTREMBLF6Q4D0, F6Q4D0_MACMU, F7FNE2, F7FNE2_MACMU, F7FNE7, F7FNE7_MACMU

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