M. mulatta Gene: FANCF - ENSMMUG00000020817 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000020817
NameFANCF
DescriptionFanconi anemia complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
OrganismMacaca mulatta (macaque)
Synonym(s)faf
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002129cerebellar cortex
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.39e3
  • 9.39e3
  • 1.18e4
  • 1.34e4
65.83
  • 65.83
  • 57.02
  • 51.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
9.91e3
  • 9.91e3
63.95
  • 63.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.06e4
63.34
  • 63.34
  • 61.26
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
60.91
  • 60.91
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
59.14
  • 59.14
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
1.13e4
  • 1.13e4
  • 1.27e4
  • 1.28e4
58.91
  • 58.91
  • 53.91
  • 53.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
57.35
  • 57.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.28e4
  • 1.39e4
56.94
  • 56.94
  • 53.52
  • 49.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
56.00
  • 56.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.51e4
55.05
  • 55.05
  • 45.09
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
1.24e4
  • 1.24e4
54.96
  • 54.96
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
54.23
  • 54.23
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
53.29
  • 53.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
1.31e4
  • 1.31e4
  • 1.39e4
  • 1.42e4
52.42
  • 52.42
  • 49.60
  • 48.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
50.98
  • 50.98
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
  • 1.52e4
49.44
  • 49.44
  • 44.79
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
48.71
  • 48.71
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.48e4
  • 1.48e4
48.41
  • 48.41
  • 46.13
  • 46.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
33.87
  • 33.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000020817.

Cross-references

EnsemblENSMMUG00000020817 (FANCF)
HGNCHGNC:3587 (FANCF)
EMBLJU333378, JU474674
Uniprot/SPTREMBLF7HSM6, F7HSM6_MACMU

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