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M. mulatta Gene: SEC22C - ENSMMUG00000021237 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000021237
NameSEC22C
DescriptionSEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
OrganismMacaca mulatta (macaque)
Synonym(s)mgc13261, mgc5373, sec22l3
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
4.81e3
  • 4.81e3
82.50
  • 82.50
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.53e3
  • 5.53e3
79.88
  • 79.88
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.59e3
  • 5.59e3
79.65
  • 79.65
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
5.98e3
  • 5.98e3
78.26
  • 78.26
AEIR
  • AEIR
UBERON:0000473testis
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.10e3
  • 6.10e3
  • 7.07e3
  • 8.40e3
77.80
  • 77.80
  • 74.27
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
6.17e3
  • 6.17e3
  • 7.88e3
  • 8.02e3
77.56
  • 77.56
  • 71.34
  • 70.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
  • 7.15e3
76.34
  • 76.34
  • 73.99
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
6.51e3
  • 6.51e3
  • 6.72e3
  • 7.70e3
76.31
  • 76.31
  • 75.56
  • 71.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
6.51e3
  • 6.51e3
76.30
  • 76.30
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.74e3
  • 6.74e3
  • 8.58e3
75.46
  • 75.46
  • 68.80
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.76e3
  • 6.76e3
  • 7.16e3
  • 8.97e3
75.40
  • 75.40
  • 73.93
  • 67.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
6.84e3
  • 6.84e3
75.10
  • 75.10
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.60e3
  • 7.60e3
72.36
  • 72.36
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
8.00e3
  • 8.00e3
70.88
  • 70.88
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.51e3
  • 8.51e3
69.02
  • 69.02
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
8.58e3
  • 8.58e3
68.80
  • 68.80
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.71e3
  • 8.71e3
  • 1.07e4
68.31
  • 68.31
  • 61.24
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
8.98e3
  • 8.98e3
67.31
  • 67.31
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
9.88e3
  • 9.88e3
64.05
  • 64.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.96e3
  • 9.96e3
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
60.94
  • 60.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
1.11e4
  • 1.11e4
  • 1.22e4
  • 1.27e4
59.62
  • 59.62
  • 55.70
  • 53.84
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000021237.

Cross-references

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