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M. domestica Gene: - ENSMODG00000000770 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000000770
Name-
Description-
OrganismMonodelphis domestica (opossum)
Orthologs(s)28 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
842
  • 842
  • 2.21e3
  • 2.46e3
96.12
  • 96.12
  • 89.79
  • 88.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
953
  • 953
95.61
  • 95.61
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
967
  • 967
95.54
  • 95.54
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.24e3
  • 1.24e3
  • 1.52e3
94.26
  • 94.26
  • 92.98
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.36e3
  • 1.36e3
  • 1.36e3
93.75
  • 93.75
  • 93.74
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
  • 1.55e3
  • 2.18e3
93.38
  • 93.38
  • 92.85
  • 89.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.62e3
  • 1.62e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.67e3
  • 1.67e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.70e3
  • 1.70e3
92.14
  • 92.14
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.06e3
  • 2.06e3
  • 2.16e3
90.49
  • 90.49
  • 90.02
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
89.25
  • 89.25
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.45e3
  • 2.45e3
  • 2.82e3
  • 2.95e3
88.70
  • 88.70
  • 87.00
  • 86.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
88.64
  • 88.64
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.47e3
  • 2.47e3
  • 3.56e3
88.60
  • 88.60
  • 83.55
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.91e3
  • 2.91e3
  • 3.28e3
  • 3.70e3
86.57
  • 86.57
  • 84.85
  • 82.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.91e3
  • 2.91e3
  • 3.26e3
  • 3.73e3
86.56
  • 86.56
  • 84.95
  • 82.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.95e3
  • 2.95e3
86.40
  • 86.40
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.18e3
  • 3.18e3
85.35
  • 85.35
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.20e3
  • 3.20e3
85.25
  • 85.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species16 genesCompare expression
Mammalia14 species17 genesCompare expression
Amniota16 species19 genesCompare expression
Tetrapoda17 species20 genesCompare expression
Euteleostomi18 species21 genesCompare expression
Bilateria25 species28 genesCompare expression

Orthology information comes from OMA : ENSMODG00000000770.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia2 genesCompare expression
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000000770.

Cross-references

EnsemblENSMODG00000000770
Uniprot/SPTREMBLF6SSU1, F6SSU1_MONDO

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