M. domestica Gene: SHD - ENSMODG00000000858 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000000858
NameSHD
DescriptionSrc homology 2 domain containing transforming protein D [Source:HGNC Symbol;Acc:HGNC:30633]
OrganismMonodelphis domestica (opossum)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
4.82e3
  • 4.82e3
  • 8.37e3
77.76
  • 77.76
  • 61.37
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.81e3
  • 6.81e3
68.57
  • 68.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
  • 7.94e3
  • 1.10e4
65.71
  • 65.71
  • 63.33
  • 49.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.83e3
  • 9.83e3
54.62
  • 54.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.08e4
  • 1.22e4
51.06
  • 51.06
  • 50.13
  • 43.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
  • 1.48e4
  • 1.67e4
47.93
  • 47.93
  • 31.58
  • 22.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
47.75
  • 47.75
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
46.57
  • 46.57
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
43.16
  • 43.16
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
35.61
  • 35.61
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
  • 1.57e4
29.92
  • 29.92
  • 27.31
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
28.04
  • 28.04
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
  • 1.59e4
28.02
  • 28.02
  • 26.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.77e4
26.11
  • 26.11
  • 18.32
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
22.16
  • 22.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000000858.

Cross-references

EnsemblENSMODG00000000858 (SHD)
HGNCHGNC:30633 (SHD)
Uniprot/SPTREMBLF7D345, F7D345_MONDO

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