M. domestica Gene: SLC16A1 - ENSMODG00000000929 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000000929
NameSLC16A1
Descriptionsolute carrier family 16 (monocarboxylate transporter), member 1 [Source:HGNC Symbol;Acc:HGNC:10922]
OrganismMonodelphis domestica (opossum)
Synonym(s)mct, mct1
Orthologs(s)20 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
85.1
  • 85.1
  • 383
99.61
  • 99.61
  • 98.24
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
282
  • 282
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
583
  • 583
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
823
  • 823
96.20
  • 96.20
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.26e3
  • 1.26e3
94.18
  • 94.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.04e3
  • 2.04e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.12e3
  • 2.12e3
  • 7.59e3
  • 1.18e4
90.20
  • 90.20
  • 64.98
  • 45.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.25e3
  • 2.25e3
  • 5.24e3
89.61
  • 89.61
  • 75.80
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.80e3
  • 2.80e3
  • 3.49e3
87.06
  • 87.06
  • 83.91
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.29e3
  • 3.29e3
  • 3.37e3
  • 5.40e3
84.81
  • 84.81
  • 84.47
  • 75.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.86e3
  • 3.86e3
  • 3.92e3
  • 4.02e3
82.19
  • 82.19
  • 81.91
  • 81.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.06e3
  • 4.06e3
  • 5.19e3
  • 5.88e3
81.27
  • 81.27
  • 76.03
  • 72.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
4.29e3
  • 4.29e3
80.21
  • 80.21
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.54e3
  • 4.54e3
79.07
  • 79.07
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.81e3
  • 4.81e3
77.81
  • 77.81
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
4.97e3
  • 4.97e3
  • 6.87e3
77.08
  • 77.08
  • 68.29
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.00e3
  • 5.00e3
76.92
  • 76.92
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
72.00
  • 72.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.90e3
  • 6.90e3
  • 7.04e3
  • 7.78e3
68.16
  • 68.16
  • 67.51
  • 64.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.42e3
  • 8.42e3
61.15
  • 61.15
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
47.22
  • 47.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSMODG00000000929.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression
Opisthokonta9 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000000929.

Cross-references

EnsemblENSMODG00000000929 (SLC16A1)
HGNCHGNC:10922 (SLC16A1)
Uniprot/SPTREMBLF7F824, F7F824_MONDO

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