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M. domestica Gene: C1orf111 - ENSMODG00000001019 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001019
NameC1orf111
Descriptionchromosome 1 open reading frame 111 [Source:HGNC Symbol;Acc:HGNC:27648]
OrganismMonodelphis domestica (opossum)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
376
  • 376
98.27
  • 98.27
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
471
  • 471
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
689
  • 689
  • 689
  • 1.02e3
96.83
  • 96.83
  • 96.82
  • 95.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.08e4
  • 1.08e4
50.31
  • 50.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
  • 1.29e4
47.82
  • 47.82
  • 40.41
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.30e4
45.56
  • 45.56
  • 40.22
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.22e4
  • 1.41e4
45.18
  • 45.18
  • 43.79
  • 34.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.34e4
39.64
  • 39.64
  • 38.12
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
38.16
  • 38.16
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
36.63
  • 36.63
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
34.89
  • 34.89
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
  • 1.58e4
34.31
  • 34.31
  • 26.97
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.50e4
  • 1.50e4
  • 1.94e4
30.70
  • 30.70
  • 10.23
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
  • 1.56e4
  • 1.60e4
29.89
  • 29.89
  • 27.85
  • 26.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
  • 1.56e4
  • 1.77e4
29.16
  • 29.16
  • 27.78
  • 18.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
26.30
  • 26.30
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
26.14
  • 26.14
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
22.13
  • 22.13
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.80e4
  • 1.80e4
16.72
  • 16.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001019.

Cross-references

EnsemblENSMODG00000001019 (C1orf111)
HGNCHGNC:27648 (C1orf111)
Uniprot/SPTREMBLF6ZFF9, F6ZFF9_MONDO

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