M. domestica Gene: CHI3L1 - ENSMODG00000001065 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001065
NameCHI3L1
Descriptionchitinase 3 like 1 [Source:HGNC Symbol;Acc:HGNC:1932]
OrganismMonodelphis domestica (opossum)
Synonym(s)gp39, ykl40
Orthologs(s)14 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
879
  • 879
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.88e3
  • 4.88e3
77.49
  • 77.49
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
6.12e3
  • 6.12e3
  • 1.17e4
  • 1.54e4
71.73
  • 71.73
  • 46.10
  • 28.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.96e3
  • 6.96e3
  • 1.45e4
67.89
  • 67.89
  • 33.11
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.08e3
  • 7.08e3
67.32
  • 67.32
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
8.04e3
  • 8.04e3
62.86
  • 62.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.83e3
  • 9.83e3
  • 1.05e4
  • 1.26e4
54.60
  • 54.60
  • 51.63
  • 41.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.92e3
  • 9.92e3
  • 1.17e4
54.22
  • 54.22
  • 45.80
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
43.88
  • 43.88
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
42.25
  • 42.25
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
40.35
  • 40.35
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.48e4
39.60
  • 39.60
  • 31.79
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.45e4
  • 1.46e4
36.10
  • 36.10
  • 33.20
  • 32.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.57e4
32.00
  • 32.00
  • 27.53
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.62e4
  • 1.62e4
25.42
  • 25.42
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.65e4
  • 1.65e4
23.77
  • 23.77
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
23.17
  • 23.17
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
22.16
  • 22.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Bilateria14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001065.

Paralogs (same species)

Cross-references

EnsemblENSMODG00000001065 (CHI3L1)
HGNCHGNC:1932 (CHI3L1)
Uniprot/SPTREMBLF6YQY7, F6YQY7_MONDO

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