M. domestica Gene: MCM5 - ENSMODG00000001152 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001152
NameMCM5
Descriptionminichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]
OrganismMonodelphis domestica (opossum)
Synonym(s)cdc46
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.29e3
  • 1.29e3
94.04
  • 94.04
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.52e3
  • 1.52e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.46e3
  • 3.46e3
  • 1.29e4
  • 1.48e4
84.05
  • 84.05
  • 40.42
  • 31.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.38e3
  • 5.38e3
75.18
  • 75.18
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.38e3
  • 5.38e3
  • 7.69e3
  • 9.79e3
75.16
  • 75.16
  • 64.48
  • 54.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
72.14
  • 72.14
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.77e3
  • 6.77e3
68.74
  • 68.74
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.96e3
  • 6.96e3
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.40e3
  • 8.40e3
  • 1.10e4
  • 1.13e4
61.20
  • 61.20
  • 49.33
  • 47.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.69e3
  • 8.69e3
  • 1.17e4
59.87
  • 59.87
  • 45.90
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.97e3
  • 8.97e3
  • 9.08e3
58.61
  • 58.61
  • 58.07
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
8.97e3
  • 8.97e3
  • 9.06e3
58.57
  • 58.57
  • 58.18
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.60e3
  • 9.60e3
  • 9.73e3
  • 1.11e4
55.69
  • 55.69
  • 55.09
  • 48.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.64e3
  • 9.64e3
55.48
  • 55.48
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
53.45
  • 53.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.20e4
51.93
  • 51.93
  • 44.80
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
47.39
  • 47.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.23e4
  • 1.34e4
46.29
  • 46.29
  • 43.42
  • 38.28
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
38.42
  • 38.42
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
31.25
  • 31.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001152.

Cross-references

EnsemblENSMODG00000001152 (MCM5)
HGNCHGNC:6948 (MCM5)
Uniprot/SPTREMBLF7D417, F7D417_MONDO

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