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M. domestica Gene: SAFB - ENSMODG00000001236 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001236
NameSAFB
DescriptionUncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F7FX32]
OrganismMonodelphis domestica (opossum)
Synonym(s)het, safb1
Orthologs(s)6 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
326
  • 326
  • 875
  • 1.05e3
98.50
  • 98.50
  • 95.96
  • 95.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
646
  • 646
97.02
  • 97.02
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
651
  • 651
97.00
  • 97.00
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
741
  • 741
  • 789
  • 1.08e3
96.58
  • 96.58
  • 96.36
  • 95.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
741
  • 741
  • 1.19e3
96.58
  • 96.58
  • 94.53
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
816
  • 816
  • 1.10e3
96.24
  • 96.24
  • 94.93
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
929
  • 929
  • 1.29e3
  • 2.04e3
95.72
  • 95.72
  • 94.06
  • 90.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.16e3
  • 1.16e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.28e3
  • 1.28e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
93.34
  • 93.34
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.50e3
  • 1.50e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.55e3
  • 1.55e3
92.86
  • 92.86
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.69e3
  • 1.69e3
92.20
  • 92.20
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.72e3
  • 1.72e3
  • 1.91e3
92.05
  • 92.05
  • 91.20
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.73e3
  • 1.73e3
  • 2.68e3
92.00
  • 92.00
  • 87.65
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.74e3
  • 1.74e3
91.96
  • 91.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.74e3
  • 1.74e3
  • 2.36e3
  • 2.45e3
91.96
  • 91.96
  • 89.11
  • 88.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.79e3
  • 1.79e3
  • 1.94e3
  • 1.99e3
91.73
  • 91.73
  • 91.03
  • 90.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.06e3
  • 2.06e3
90.48
  • 90.48
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.25e3
  • 3.25e3
85.02
  • 85.02
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
84.41
  • 84.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Amniota1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000001236.

Cross-references

EnsemblENSMODG00000001236 (SAFB)
HGNCHGNC:10520 (SAFB)
Uniprot/SPTREMBLF7FX32, F7FX32_MONDO

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