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M. domestica Gene: ARPC1A - ENSMODG00000001303 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001303
NameARPC1A
Descriptionactin related protein 2/3 complex subunit 1A [Source:HGNC Symbol;Acc:HGNC:703]
OrganismMonodelphis domestica (opossum)
Synonym(s)arc40, sop2hs, sop2l
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
271
  • 271
  • 308
98.75
  • 98.75
  • 98.58
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
368
  • 368
98.30
  • 98.30
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
434
  • 434
  • 713
98.00
  • 98.00
  • 96.71
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
441
  • 441
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
467
  • 467
  • 573
  • 824
97.85
  • 97.85
  • 97.36
  • 96.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
522
  • 522
97.60
  • 97.60
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
557
  • 557
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
578
  • 578
  • 710
  • 1.01e3
97.34
  • 97.34
  • 96.73
  • 95.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
638
  • 638
97.06
  • 97.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
705
  • 705
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
789
  • 789
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
819
  • 819
  • 873
96.22
  • 96.22
  • 95.97
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
878
  • 878
  • 878
95.95
  • 95.95
  • 95.95
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.21e3
  • 1.21e3
  • 1.24e3
  • 1.49e3
94.40
  • 94.40
  • 94.30
  • 93.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
  • 1.86e3
  • 1.90e3
92.47
  • 92.47
  • 91.42
  • 91.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
91.58
  • 91.58
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.08e3
  • 2.08e3
90.42
  • 90.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.73e3
  • 4.73e3
  • 4.85e3
  • 4.89e3
78.14
  • 78.14
  • 77.63
  • 77.42
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.89e3
  • 4.89e3
77.43
  • 77.43
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.69e3
  • 5.69e3
73.73
  • 73.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001303.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000001303.

Cross-references

EnsemblENSMODG00000001303 (ARPC1A)
HGNCHGNC:703 (ARPC1A)
Uniprot/SPTREMBLF7BZM9, F7BZM9_MONDO

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