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M. domestica Gene: ARPC1B - ENSMODG00000001316 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001316
NameARPC1B
Descriptionactin related protein 2/3 complex subunit 1B [Source:HGNC Symbol;Acc:HGNC:704]
OrganismMonodelphis domestica (opossum)
Synonym(s)arc41, p40-arc, p41-arc
Orthologs(s)24 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
637
  • 637
97.07
  • 97.07
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
644
  • 644
97.03
  • 97.03
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
795
  • 795
96.33
  • 96.33
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
871
  • 871
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.43e3
  • 1.43e3
  • 9.90e3
93.41
  • 93.41
  • 54.31
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.06e3
  • 2.06e3
  • 2.82e3
90.50
  • 90.50
  • 86.99
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.14e3
  • 2.14e3
  • 3.60e3
  • 6.32e3
90.15
  • 90.15
  • 83.37
  • 70.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.20e3
  • 2.20e3
89.84
  • 89.84
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.84e3
  • 2.84e3
  • 4.28e3
86.91
  • 86.91
  • 80.25
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.20e3
  • 3.20e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.69e3
  • 4.69e3
  • 4.76e3
  • 6.27e3
78.34
  • 78.34
  • 78.03
  • 71.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.78e3
  • 4.78e3
77.94
  • 77.94
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.03e3
  • 5.03e3
76.77
  • 76.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.28e3
  • 5.28e3
  • 5.48e3
  • 5.89e3
75.63
  • 75.63
  • 74.71
  • 72.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.31e3
  • 5.31e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.44e3
  • 5.44e3
  • 7.50e3
74.90
  • 74.90
  • 65.38
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.52e3
  • 5.52e3
  • 6.25e3
  • 8.39e3
74.52
  • 74.52
  • 71.14
  • 61.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.32e3
  • 8.32e3
61.61
  • 61.61
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
53.59
  • 53.59
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
  • 1.18e4
  • 1.44e4
47.17
  • 47.17
  • 45.52
  • 33.40
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001316.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000001316.

Cross-references

EnsemblENSMODG00000001316 (ARPC1B)
HGNCHGNC:704 (ARPC1B)
Uniprot/SPTREMBLF7BE06, F7BE06_MONDO

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