M. domestica Gene: IRX4 - ENSMODG00000001437 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001437
NameIRX4
Descriptioniroquois homeobox 4 [Source:HGNC Symbol;Acc:HGNC:6129]
OrganismMonodelphis domestica (opossum)
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.34e3
  • 1.34e3
  • 1.60e3
  • 1.80e3
93.80
  • 93.80
  • 92.63
  • 91.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
8.44e3
  • 8.44e3
  • 1.70e4
61.06
  • 61.06
  • 21.56
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
48.65
  • 48.65
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.31e4
  • 1.31e4
  • 1.55e4
39.75
  • 39.75
  • 28.57
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
32.39
  • 32.39
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
31.81
  • 31.81
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.55e4
  • 1.55e4
28.36
  • 28.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001437.

Cross-references

EnsemblENSMODG00000001437 (IRX4)
HGNCHGNC:6129 (IRX4)
Uniprot/SPTREMBLF7BC96, F7BC96_MONDO

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