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M. domestica Gene: RBM39 - ENSMODG00000001557 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001557
NameRBM39
DescriptionRNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923]
OrganismMonodelphis domestica (opossum)
Synonym(s)caper, caperalpha, cc1.3, fsap59, hcc1, rnpc2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
421
  • 421
  • 515
  • 1.05e3
98.06
  • 98.06
  • 97.63
  • 95.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
450
  • 450
  • 586
97.93
  • 97.93
  • 97.30
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
523
  • 523
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
755
  • 755
96.52
  • 96.52
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
794
  • 794
96.34
  • 96.34
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
810
  • 810
  • 1.81e3
96.27
  • 96.27
  • 91.66
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
922
  • 922
  • 1.41e3
  • 1.47e3
95.75
  • 95.75
  • 93.52
  • 93.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
95.29
  • 95.29
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.12e3
  • 1.12e3
94.84
  • 94.84
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.36e3
  • 1.36e3
  • 1.52e3
93.74
  • 93.74
  • 93.01
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.36e3
  • 1.36e3
  • 1.88e3
  • 2.37e3
93.73
  • 93.73
  • 91.32
  • 89.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.49e3
  • 1.49e3
  • 1.67e3
  • 2.24e3
93.13
  • 93.13
  • 92.28
  • 89.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.53e3
  • 1.53e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.63e3
  • 1.63e3
  • 1.82e3
  • 1.99e3
92.48
  • 92.48
  • 91.61
  • 90.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
91.55
  • 91.55
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.93e3
  • 1.93e3
  • 2.91e3
91.11
  • 91.11
  • 86.56
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.32e3
  • 2.32e3
89.29
  • 89.29
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.53e3
  • 2.53e3
88.33
  • 88.33
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.59e3
  • 2.59e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.24e3
  • 3.24e3
85.06
  • 85.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000001557 (RBM39)
HGNCHGNC:15923 (RBM39)
Uniprot/SPTREMBLF7BX84, F7BX84_MONDO

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