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M. domestica Gene: TMC6 - ENSMODG00000001805 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001805
NameTMC6
Descriptiontransmembrane channel like 6 [Source:HGNC Symbol;Acc:HGNC:18021]
OrganismMonodelphis domestica (opossum)
Synonym(s)ever1, evin1, lak-4p
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.92e3
  • 3.92e3
81.91
  • 81.91
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.12e3
  • 7.12e3
67.13
  • 67.13
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
7.38e3
  • 7.38e3
  • 1.35e4
65.93
  • 65.93
  • 37.85
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.60e3
  • 7.60e3
64.94
  • 64.94
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.25e3
  • 8.25e3
  • 1.06e4
61.93
  • 61.93
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.69e3
  • 8.69e3
  • 1.45e4
  • 1.46e4
59.87
  • 59.87
  • 32.96
  • 32.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.71e3
  • 8.71e3
59.80
  • 59.80
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.19e3
  • 9.19e3
  • 1.01e4
  • 1.12e4
57.58
  • 57.58
  • 53.44
  • 48.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.30e3
  • 9.30e3
57.05
  • 57.05
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.51e3
  • 9.51e3
  • 9.70e3
56.08
  • 56.08
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.61e3
  • 9.61e3
  • 1.12e4
  • 1.17e4
55.65
  • 55.65
  • 48.17
  • 45.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.79e3
  • 9.79e3
  • 1.11e4
54.80
  • 54.80
  • 48.66
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.27e4
  • 1.32e4
49.28
  • 49.28
  • 41.27
  • 39.06
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
48.61
  • 48.61
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
45.46
  • 45.46
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
44.11
  • 44.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.37e4
  • 1.39e4
42.28
  • 42.28
  • 36.70
  • 35.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
37.68
  • 37.68
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.43e4
  • 1.43e4
34.16
  • 34.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001805.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000001805.

Cross-references

EnsemblENSMODG00000001805 (TMC6)
HGNCHGNC:18021 (TMC6)
Uniprot/SPTREMBLF6T5X5, F6T5X5_MONDO

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