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M. domestica Gene: KHSRP - ENSMODG00000001952 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000001952
NameKHSRP
DescriptionKH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
OrganismMonodelphis domestica (opossum)
Synonym(s)fbp2, fubp2, ksrp
Orthologs(s)15 orthologs
Paralog(s)29 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
830
  • 830
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
844
  • 844
96.11
  • 96.11
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.30e3
  • 1.30e3
  • 1.85e3
94.02
  • 94.02
  • 91.49
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
  • 1.94e3
  • 1.96e3
91.62
  • 91.62
  • 91.04
  • 90.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.89e3
  • 1.89e3
  • 3.09e3
  • 3.11e3
91.30
  • 91.30
  • 85.72
  • 85.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.39e3
  • 2.39e3
88.98
  • 88.98
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.77e3
  • 2.77e3
87.22
  • 87.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.80e3
  • 2.80e3
87.09
  • 87.09
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.99e3
  • 2.99e3
  • 4.25e3
86.19
  • 86.19
  • 80.39
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.04e3
  • 3.04e3
  • 3.25e3
85.98
  • 85.98
  • 85.01
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.17e3
  • 3.17e3
  • 4.11e3
  • 4.12e3
85.38
  • 85.38
  • 81.05
  • 81.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.53e3
  • 3.53e3
  • 3.84e3
83.70
  • 83.70
  • 82.29
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.85e3
  • 3.85e3
  • 5.00e3
  • 5.97e3
82.21
  • 82.21
  • 76.93
  • 72.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.86e3
  • 3.86e3
82.20
  • 82.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.14e3
  • 4.14e3
80.89
  • 80.89
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
4.21e3
  • 4.21e3
80.55
  • 80.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.29e3
  • 4.29e3
  • 4.54e3
  • 5.01e3
80.20
  • 80.20
  • 79.05
  • 76.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
79.14
  • 79.14
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.10e3
  • 5.10e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.12e3
  • 5.12e3
76.36
  • 76.36
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.49e3
  • 6.49e3
70.06
  • 70.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000001952.

Paralogs (same species)

Cross-references

EnsemblENSMODG00000001952 (KHSRP)
HGNCHGNC:6316 (KHSRP)
Uniprot/SPTREMBLF6VJN4, F6VJN4_MONDO

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