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M. domestica Gene: SCG3 - ENSMODG00000002026 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000002026
NameSCG3
Descriptionsecretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj90833, sgiii

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.40e3
  • 1.40e3
  • 1.50e3
93.52
  • 93.52
  • 93.10
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
2.01e3
  • 2.01e3
  • 2.47e3
  • 5.99e3
90.73
  • 90.73
  • 88.60
  • 72.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.05e3
  • 4.05e3
81.29
  • 81.29
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.48e3
  • 7.48e3
65.48
  • 65.48
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.26e4
46.83
  • 46.83
  • 41.91
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
45.45
  • 45.45
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
42.96
  • 42.96
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.44e4
42.46
  • 42.46
  • 33.39
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
41.91
  • 41.91
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
41.28
  • 41.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.37e4
  • 1.39e4
39.85
  • 39.85
  • 36.83
  • 36.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
37.56
  • 37.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
35.77
  • 35.77
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
34.17
  • 34.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
34.15
  • 34.15
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.43e4
  • 1.43e4
33.86
  • 33.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
  • 1.51e4
  • 1.52e4
33.36
  • 33.36
  • 30.42
  • 29.76
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
33.26
  • 33.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000002026 (SCG3)
HGNCHGNC:13707 (SCG3)
Uniprot/SPTREMBLF6QX21, F6QX21_MONDO

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