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M. domestica Gene: PFN4 - ENSMODG00000002157 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000002157
NamePFN4
Descriptionprofilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
OrganismMonodelphis domestica (opossum)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.76e3
  • 1.76e3
  • 1.77e3
  • 2.05e3
91.87
  • 91.87
  • 91.82
  • 90.52
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.26e3
  • 3.26e3
84.97
  • 84.97
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
3.64e3
  • 3.64e3
83.20
  • 83.20
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.85e3
  • 3.85e3
82.22
  • 82.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.39e3
  • 6.39e3
  • 6.76e3
70.52
  • 70.52
  • 68.82
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
7.00e3
  • 7.00e3
  • 9.18e3
  • 9.25e3
67.70
  • 67.70
  • 57.61
  • 57.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.19e3
  • 8.19e3
  • 1.05e4
  • 1.17e4
62.18
  • 62.18
  • 51.52
  • 45.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.92e3
  • 8.92e3
  • 1.02e4
  • 1.24e4
58.83
  • 58.83
  • 53.00
  • 42.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.57e3
  • 9.57e3
55.82
  • 55.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
9.69e3
  • 9.69e3
  • 1.02e4
55.25
  • 55.25
  • 52.86
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.72e3
  • 9.72e3
55.13
  • 55.13
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.74e3
  • 9.74e3
  • 1.15e4
55.05
  • 55.05
  • 46.73
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.99e3
  • 9.99e3
53.88
  • 53.88
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
52.83
  • 52.83
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.17e4
  • 1.30e4
50.52
  • 50.52
  • 46.15
  • 39.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
  • 1.10e4
50.48
  • 50.48
  • 49.10
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
49.74
  • 49.74
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
48.98
  • 48.98
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
48.62
  • 48.62
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
41.37
  • 41.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000002157.

Cross-references

EnsemblENSMODG00000002157 (PFN4)
HGNCHGNC:31103 (PFN4)
Uniprot/SPTREMBLH9H600, H9H600_MONDO

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