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M. domestica Gene: NUP62CL - ENSMODG00000002278 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000002278
NameNUP62CL
Descriptionnucleoporin 62kDa C-terminal like [Source:HGNC Symbol;Acc:HGNC:25960]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj20130
Orthologs(s)17 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
662
  • 662
  • 1.58e3
96.95
  • 96.95
  • 92.71
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.15e3
  • 1.15e3
94.69
  • 94.69
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.26e3
  • 1.26e3
94.19
  • 94.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.29e3
  • 1.29e3
  • 1.84e3
  • 2.20e3
94.06
  • 94.06
  • 91.51
  • 89.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.93e3
  • 1.93e3
  • 2.65e3
91.09
  • 91.09
  • 87.78
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.93e3
  • 1.93e3
  • 2.14e3
  • 2.52e3
91.08
  • 91.08
  • 90.12
  • 88.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
2.63e3
  • 2.63e3
87.87
  • 87.87
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.35e3
  • 3.35e3
84.53
  • 84.53
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.42e3
  • 3.42e3
  • 5.19e3
84.20
  • 84.20
  • 76.04
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.18e3
  • 4.18e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
4.36e3
  • 4.36e3
79.86
  • 79.86
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
4.39e3
  • 4.39e3
79.76
  • 79.76
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.70e3
  • 4.70e3
78.30
  • 78.30
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.76e3
  • 4.76e3
78.01
  • 78.01
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.50e3
  • 5.50e3
74.62
  • 74.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.89e3
  • 5.89e3
  • 7.04e3
  • 7.69e3
72.79
  • 72.79
  • 67.49
  • 64.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.16e3
  • 6.16e3
  • 6.83e3
71.58
  • 71.58
  • 68.47
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.12e3
  • 7.12e3
67.13
  • 67.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.18e3
  • 7.18e3
  • 7.82e3
  • 8.00e3
66.86
  • 66.86
  • 63.88
  • 63.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.70e3
  • 8.70e3
  • 8.75e3
  • 9.11e3
59.86
  • 59.86
  • 59.62
  • 57.95
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.96e3
  • 9.96e3
54.04
  • 54.04
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
52.77
  • 52.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria6 species6 genesCompare expression
Mammalia7 species7 genesCompare expression
Amniota9 species9 genesCompare expression
Tetrapoda10 species10 genesCompare expression
Euteleostomi11 species11 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000002278.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000002278.

Cross-references

EnsemblENSMODG00000002278 (NUP62CL)
HGNCHGNC:25960 (NUP62CL)
Uniprot/SPTREMBLF7CVP0, F7CVP0_MONDO

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