M. domestica Gene: CCT5 - ENSMODG00000002356 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000002356
NameCCT5
Descriptionchaperonin containing TCP1, subunit 5 (epsilon) [Source:HGNC Symbol;Acc:HGNC:1618]
OrganismMonodelphis domestica (opossum)
Synonym(s)kiaa0098
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
409
  • 409
98.12
  • 98.12
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
469
  • 469
97.84
  • 97.84
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
481
  • 481
97.78
  • 97.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
550
  • 550
  • 849
  • 942
97.47
  • 97.47
  • 96.08
  • 95.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
636
  • 636
  • 2.10e3
  • 2.58e3
97.07
  • 97.07
  • 90.31
  • 88.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
679
  • 679
  • 780
96.87
  • 96.87
  • 96.40
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
717
  • 717
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
828
  • 828
  • 1.13e3
96.18
  • 96.18
  • 94.80
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
969
  • 969
  • 1.37e3
  • 1.53e3
95.53
  • 95.53
  • 93.70
  • 92.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.05e3
  • 1.05e3
  • 1.88e3
95.16
  • 95.16
  • 91.31
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.15e3
  • 1.15e3
94.71
  • 94.71
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
92.67
  • 92.67
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
92.51
  • 92.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.69e3
  • 1.69e3
  • 2.18e3
  • 2.71e3
92.21
  • 92.21
  • 89.93
  • 87.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.04e3
  • 2.04e3
90.61
  • 90.61
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.23e3
  • 2.23e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.36e3
  • 2.36e3
  • 2.75e3
  • 2.92e3
89.10
  • 89.10
  • 87.31
  • 86.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.47e3
  • 2.47e3
88.58
  • 88.58
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.73e3
  • 2.73e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.20e3
  • 3.20e3
  • 3.59e3
85.22
  • 85.22
  • 83.43
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.23e3
  • 3.23e3
85.09
  • 85.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000002356.

Cross-references

EnsemblENSMODG00000002356 (CCT5)
HGNCHGNC:1618 (CCT5)
Uniprot/SPTREMBLF7GDM7, F7GDM7_MONDO

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