M. domestica Gene: IRF6 - ENSMODG00000002539 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000002539
NameIRF6
Descriptioninterferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
OrganismMonodelphis domestica (opossum)
Synonym(s)lps, ofc6, vws, vws1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.59e3
  • 1.59e3
  • 4.54e3
92.65
  • 92.65
  • 79.02
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.21e3
  • 3.21e3
  • 3.69e3
85.20
  • 85.20
  • 82.98
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.68e3
  • 3.68e3
83.03
  • 83.03
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.71e3
  • 3.71e3
82.86
  • 82.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.80e3
  • 3.80e3
  • 5.08e3
  • 5.32e3
82.48
  • 82.48
  • 76.55
  • 75.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
4.44e3
  • 4.44e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
79.45
  • 79.45
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.01e3
  • 5.01e3
  • 6.18e3
  • 7.82e3
76.89
  • 76.89
  • 71.47
  • 63.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.97e3
  • 5.97e3
72.44
  • 72.44
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.35e3
  • 6.35e3
  • 6.53e3
70.70
  • 70.70
  • 69.85
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
  • 7.36e3
  • 8.05e3
67.24
  • 67.24
  • 66.03
  • 62.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.13e3
  • 7.13e3
67.10
  • 67.10
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.48e3
  • 8.48e3
60.88
  • 60.88
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.24e4
  • 1.25e4
53.46
  • 53.46
  • 42.86
  • 42.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
45.51
  • 45.51
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.24e4
  • 1.24e4
  • 1.45e4
42.66
  • 42.66
  • 33.20
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
23.13
  • 23.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000002539 (IRF6)
HGNCHGNC:6121 (IRF6)
Uniprot/SPTREMBLF7AM32, F7AM32_MONDO

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