M. domestica Gene: CLTA - ENSMODG00000002610 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000002610
NameCLTA
Descriptionclathrin, light chain A [Source:HGNC Symbol;Acc:HGNC:2090]
OrganismMonodelphis domestica (opossum)
Synonym(s)lca
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
294
  • 294
98.65
  • 98.65
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
300
  • 300
  • 311
98.62
  • 98.62
  • 98.57
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
342
  • 342
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
350
  • 350
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
365
  • 365
  • 380
  • 600
98.32
  • 98.32
  • 98.25
  • 97.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
410
  • 410
  • 517
  • 553
98.11
  • 98.11
  • 97.62
  • 97.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
431
  • 431
98.02
  • 98.02
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
491
  • 491
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
500
  • 500
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
549
  • 549
  • 632
97.47
  • 97.47
  • 97.09
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
576
  • 576
97.35
  • 97.35
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
588
  • 588
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
643
  • 643
  • 669
97.04
  • 97.04
  • 96.92
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
852
  • 852
  • 984
  • 1.06e3
96.07
  • 96.07
  • 95.46
  • 95.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
854
  • 854
  • 861
96.06
  • 96.06
  • 96.03
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.12e3
  • 1.12e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.61e3
  • 1.61e3
  • 1.96e3
  • 2.16e3
92.58
  • 92.58
  • 90.94
  • 90.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.08e3
  • 2.08e3
  • 2.48e3
  • 2.87e3
90.42
  • 90.42
  • 88.58
  • 86.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.29e3
  • 2.29e3
89.44
  • 89.44
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.75e3
  • 2.75e3
87.32
  • 87.32
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.21e3
  • 4.21e3
80.59
  • 80.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000002610.

Cross-references

EnsemblENSMODG00000002610 (CLTA)
HGNCHGNC:2090 (CLTA)
Uniprot/SPTREMBLF7G4M4, F7G4M4_MONDO

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