M. domestica Gene: SPIC - ENSMODG00000003044 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003044
NameSPIC
DescriptionSpi-C transcription factor (Spi-1/PU.1 related) [Source:HGNC Symbol;Acc:HGNC:29549]
OrganismMonodelphis domestica (opossum)
Synonym(s)mgc40611, spi-c
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.64e3
  • 9.64e3
  • 1.58e4
55.51
  • 55.51
  • 27.13
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.34e4
  • 1.57e4
43.59
  • 43.59
  • 38.05
  • 27.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
42.70
  • 42.70
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.43e4
  • 1.43e4
33.92
  • 33.92
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.51e4
30.95
  • 30.95
  • 30.15
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 2.14e4
29.68
  • 29.68
  • 1.19
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.97e4
24.56
  • 24.56
  • 9.01
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
18.46
  • 18.46
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.80e4
  • 1.80e4
17.10
  • 17.10
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.85e4
  • 1.85e4
14.49
  • 14.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species17 genesCompare expression
Mammalia15 species18 genesCompare expression
Amniota17 species20 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003044.

Cross-references

EnsemblENSMODG00000003044 (SPIC)
HGNCHGNC:29549 (SPIC)
Uniprot/SPTREMBLF6Q0A9, F6Q0A9_MONDO

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