M. domestica Gene: BATF3 - ENSMODG00000003055 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003055
NameBATF3
Descriptionbasic leucine zipper transcription factor, ATF-like 3 [Source:HGNC Symbol;Acc:HGNC:28915]
OrganismMonodelphis domestica (opossum)
Synonym(s)jdp1, jundm1, snft
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.61e3
  • 8.61e3
60.24
  • 60.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
53.75
  • 53.75
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
50.25
  • 50.25
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
41.52
  • 41.52
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.27e4
  • 1.27e4
  • 1.48e4
41.35
  • 41.35
  • 31.54
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.30e4
41.09
  • 41.09
  • 40.03
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
  • 1.29e4
  • 1.29e4
40.80
  • 40.80
  • 40.39
  • 40.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.37e4
  • 1.37e4
36.82
  • 36.82
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
36.67
  • 36.67
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
  • 1.40e4
35.89
  • 35.89
  • 35.41
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
34.44
  • 34.44
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
34.31
  • 34.31
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
34.26
  • 34.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
33.92
  • 33.92
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
  • 1.50e4
  • 1.53e4
33.20
  • 33.20
  • 30.73
  • 29.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
  • 1.46e4
  • 1.48e4
32.62
  • 32.62
  • 32.48
  • 31.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
  • 1.57e4
32.05
  • 32.05
  • 27.73
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
32.02
  • 32.02
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
31.24
  • 31.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
  • 1.70e4
  • 1.80e4
23.85
  • 23.85
  • 21.48
  • 16.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.66e4
  • 1.66e4
23.32
  • 23.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003055.

Cross-references

EnsemblENSMODG00000003055 (BATF3)
HGNCHGNC:28915 (BATF3)
Uniprot/SPTREMBLF6PNW6, F6PNW6_MONDO

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