M. domestica Gene: GTDC1 - ENSMODG00000003084 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003084
NameGTDC1
Descriptionglycosyltransferase like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20887]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj11753, hmat-xa
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
7.44e3
  • 7.44e3
65.67
  • 65.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.58e3
  • 7.58e3
  • 8.75e3
  • 9.98e3
65.02
  • 65.02
  • 59.61
  • 53.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.79e3
  • 7.79e3
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.53e3
  • 8.53e3
60.64
  • 60.64
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
9.06e3
  • 9.06e3
  • 9.50e3
58.19
  • 58.19
  • 56.16
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
  • 1.11e4
  • 1.16e4
56.05
  • 56.05
  • 48.87
  • 46.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
9.72e3
  • 9.72e3
55.14
  • 55.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.06e4
  • 1.07e4
53.84
  • 53.84
  • 51.16
  • 50.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.18e4
53.52
  • 53.52
  • 45.50
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.09e4
51.19
  • 51.19
  • 49.62
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
50.04
  • 50.04
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
48.30
  • 48.30
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
48.26
  • 48.26
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
47.11
  • 47.11
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
46.88
  • 46.88
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
  • 1.19e4
46.56
  • 46.56
  • 45.08
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.40e4
44.64
  • 44.64
  • 42.29
  • 35.58
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
44.58
  • 44.58
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
41.18
  • 41.18
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
40.81
  • 40.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
  • 1.57e4
  • 1.60e4
27.67
  • 27.67
  • 27.48
  • 26.12
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003084.

Cross-references

EnsemblENSMODG00000003084 (GTDC1)
HGNCHGNC:20887 (GTDC1)
Uniprot/SPTREMBLF6PL49, F6PL49_MONDO

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