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M. domestica Gene: PTPN11 - ENSMODG00000003120 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003120
NamePTPN11
Descriptionprotein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:HGNC:9644]
OrganismMonodelphis domestica (opossum)
Synonym(s)bptp3, ns1, ptp2c, sh-ptp2, shp-2, shp2
Orthologs(s)20 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
  • 4.98e3
  • 5.69e3
90.30
  • 90.30
  • 77.02
  • 73.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.61e3
  • 2.61e3
  • 3.05e3
87.93
  • 87.93
  • 85.94
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
2.62e3
  • 2.62e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
  • 3.25e3
  • 5.33e3
87.47
  • 87.47
  • 85.00
  • 75.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.73e3
  • 2.73e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.79e3
  • 2.79e3
  • 3.00e3
87.12
  • 87.12
  • 86.15
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.98e3
  • 2.98e3
  • 3.27e3
  • 3.82e3
86.25
  • 86.25
  • 84.89
  • 82.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.03e3
  • 3.03e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.26e3
  • 3.26e3
  • 3.84e3
84.96
  • 84.96
  • 82.28
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.74e3
  • 3.74e3
82.73
  • 82.73
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.88e3
  • 3.88e3
82.11
  • 82.11
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.91e3
  • 3.91e3
81.95
  • 81.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.01e3
  • 4.01e3
  • 4.21e3
  • 4.71e3
81.50
  • 81.50
  • 80.55
  • 78.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.29e3
  • 4.29e3
80.21
  • 80.21
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.43e3
  • 4.43e3
79.56
  • 79.56
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.68e3
  • 4.68e3
78.40
  • 78.40
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
5.01e3
  • 5.01e3
  • 6.21e3
76.89
  • 76.89
  • 71.33
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
  • 6.75e3
  • 8.18e3
75.30
  • 75.30
  • 68.82
  • 62.25
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.83e3
  • 5.83e3
73.10
  • 73.10
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.22e3
  • 6.22e3
71.27
  • 71.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003120.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000003120.

Cross-references

EnsemblENSMODG00000003120 (PTPN11)
HGNCHGNC:9644 (PTPN11)
Uniprot/SPTREMBLF6WVD2, F6WVD2_MONDO

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