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M. domestica Gene: COX6A1 - ENSMODG00000003168 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003168
NameCOX6A1
Descriptioncytochrome c oxidase subunit VIa polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:2277]
OrganismMonodelphis domestica (opossum)
Synonym(s)cox6a
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
254
  • 254
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
296
  • 296
  • 444
  • 924
98.64
  • 98.64
  • 97.95
  • 95.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
301
  • 301
  • 313
98.61
  • 98.61
  • 98.56
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
337
  • 337
  • 530
  • 604
98.45
  • 98.45
  • 97.56
  • 97.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
387
  • 387
98.22
  • 98.22
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
394
  • 394
98.19
  • 98.19
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
460
  • 460
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
516
  • 516
  • 539
97.62
  • 97.62
  • 97.52
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
581
  • 581
97.32
  • 97.32
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
652
  • 652
  • 1.11e3
96.99
  • 96.99
  • 94.89
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
661
  • 661
96.95
  • 96.95
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
677
  • 677
  • 1.53e3
  • 2.83e3
96.88
  • 96.88
  • 92.95
  • 86.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
709
  • 709
  • 1.08e3
  • 2.53e3
96.73
  • 96.73
  • 95.01
  • 88.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
726
  • 726
96.65
  • 96.65
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
748
  • 748
96.55
  • 96.55
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
919
  • 919
95.76
  • 95.76
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
963
  • 963
95.56
  • 95.56
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.21e3
  • 1.21e3
94.42
  • 94.42
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.50e3
  • 1.50e3
  • 1.66e3
93.07
  • 93.07
  • 92.34
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.65e3
  • 1.65e3
  • 1.94e3
  • 2.49e3
92.37
  • 92.37
  • 91.05
  • 88.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.43e3
  • 2.43e3
88.80
  • 88.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species18 genesCompare expression
Amniota15 species20 genesCompare expression
Tetrapoda16 species22 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003168.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000003168.

Cross-references

EnsemblENSMODG00000003168 (COX6A1)
HGNCHGNC:2277 (COX6A1)
Uniprot/SPTREMBLF6WDG4, F6WDG4_MONDO

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