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M. domestica Gene: MSI1 - ENSMODG00000003189 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003189
NameMSI1
Descriptionmusashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
OrganismMonodelphis domestica (opossum)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.98e3
  • 1.98e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.50e3
  • 2.50e3
88.48
  • 88.48
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.56e3
  • 2.56e3
88.19
  • 88.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.01e3
  • 3.01e3
  • 5.70e3
  • 5.96e3
86.13
  • 86.13
  • 73.70
  • 72.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.03e3
  • 3.03e3
  • 3.24e3
  • 3.63e3
86.03
  • 86.03
  • 85.03
  • 83.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
84.47
  • 84.47
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.50e3
  • 3.50e3
83.86
  • 83.86
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
4.96e3
  • 4.96e3
  • 6.56e3
77.10
  • 77.10
  • 69.73
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.20e3
  • 5.20e3
  • 6.61e3
  • 7.94e3
75.99
  • 75.99
  • 69.51
  • 63.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.18e3
  • 6.18e3
  • 6.59e3
  • 9.96e3
71.47
  • 71.47
  • 69.56
  • 54.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.22e3
  • 8.22e3
62.07
  • 62.07
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.87e3
  • 8.87e3
  • 9.59e3
59.03
  • 59.03
  • 55.73
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.44e3
  • 9.44e3
  • 1.29e4
  • 1.45e4
56.41
  • 56.41
  • 40.37
  • 33.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.56e3
  • 9.56e3
  • 1.03e4
55.86
  • 55.86
  • 52.39
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.95e3
  • 9.95e3
54.05
  • 54.05
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.27
  • 52.27
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
50.01
  • 50.01
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.18e4
47.45
  • 47.45
  • 45.35
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
33.17
  • 33.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003189.

Cross-references

EnsemblENSMODG00000003189 (MSI1)
HGNCHGNC:7330 (MSI1)
Uniprot/SPTREMBLF6VEK6, F6VEK6_MONDO

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