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M. domestica Gene: RAB3A - ENSMODG00000003214 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003214
NameRAB3A
DescriptionRAB3A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9777]
OrganismMonodelphis domestica (opossum)
Orthologs(s)21 orthologs
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
423
  • 423
  • 641
  • 5.64e3
98.05
  • 98.05
  • 97.05
  • 73.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
467
  • 467
97.85
  • 97.85
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
789
  • 789
  • 1.45e3
96.36
  • 96.36
  • 93.32
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.48e3
  • 7.48e3
  • 7.78e3
  • 8.22e3
65.49
  • 65.49
  • 64.07
  • 62.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.46e3
  • 8.46e3
60.93
  • 60.93
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.61e3
  • 8.61e3
60.23
  • 60.23
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.90e3
  • 8.90e3
58.91
  • 58.91
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.83e3
  • 9.83e3
54.61
  • 54.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
  • 1.04e4
52.26
  • 52.26
  • 51.91
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
  • 1.06e4
  • 1.25e4
51.86
  • 51.86
  • 50.86
  • 42.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
49.08
  • 49.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
  • 1.28e4
  • 1.37e4
48.93
  • 48.93
  • 41.05
  • 36.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
45.15
  • 45.15
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
44.44
  • 44.44
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
44.16
  • 44.16
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
  • 1.34e4
43.39
  • 43.39
  • 38.07
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
42.36
  • 42.36
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
41.47
  • 41.47
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
  • 1.33e4
40.91
  • 40.91
  • 38.56
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.36e4
  • 1.40e4
40.55
  • 40.55
  • 37.29
  • 35.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
39.38
  • 39.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003214.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression
Eumetazoa3 genesCompare expression
Eukaryota64 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000003214.

Cross-references

EnsemblENSMODG00000003214 (RAB3A)
HGNCHGNC:9777 (RAB3A)
Uniprot/SPTREMBLF6TZ81, F6TZ81_MONDO

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