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M. domestica Gene: LRRC45 - ENSMODG00000003220 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003220
NameLRRC45
Descriptionleucine rich repeat containing 45 [Source:HGNC Symbol;Acc:HGNC:28302]
OrganismMonodelphis domestica (opossum)
Synonym(s)mgc20806
Orthologs(s)16 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
509
  • 509
  • 945
  • 1.07e3
97.65
  • 97.65
  • 95.64
  • 95.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
677
  • 677
  • 1.69e3
  • 1.82e3
96.88
  • 96.88
  • 92.21
  • 91.58
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
814
  • 814
96.25
  • 96.25
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
969
  • 969
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.14e3
  • 1.14e3
94.76
  • 94.76
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.27e3
  • 1.27e3
  • 1.44e3
94.15
  • 94.15
  • 93.35
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.32e3
  • 1.32e3
  • 1.33e3
93.90
  • 93.90
  • 93.85
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.43e3
  • 1.43e3
  • 2.11e3
  • 2.38e3
93.38
  • 93.38
  • 90.25
  • 89.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.47e3
  • 1.47e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.61e3
  • 1.61e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.66e3
  • 1.66e3
  • 2.37e3
92.34
  • 92.34
  • 89.07
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.71e3
  • 1.71e3
92.10
  • 92.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.71e3
  • 1.71e3
  • 1.89e3
  • 2.36e3
92.09
  • 92.09
  • 91.29
  • 89.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.76e3
  • 1.76e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.87e3
  • 1.87e3
91.37
  • 91.37
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.00e3
  • 2.00e3
  • 2.16e3
  • 2.52e3
90.79
  • 90.79
  • 90.02
  • 88.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
90.00
  • 90.00
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.29e3
  • 2.29e3
89.45
  • 89.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.53e3
  • 2.53e3
  • 2.90e3
88.31
  • 88.31
  • 86.62
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.08e3
  • 3.08e3
85.78
  • 85.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003220.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000003220.

Cross-references

EnsemblENSMODG00000003220 (LRRC45)
HGNCHGNC:28302 (LRRC45)
Uniprot/SPTREMBLF6TYV3, F6TYV3_MONDO, F6TZN1, F6TZN1_MONDO

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