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M. domestica Gene: CHORDC1 - ENSMODG00000003221 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003221
NameCHORDC1
Descriptioncysteine and histidine rich domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14525]
OrganismMonodelphis domestica (opossum)
Synonym(s)chp-1, chp1
Orthologs(s)26 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.05e3
  • 2.05e3
90.53
  • 90.53
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.42e3
  • 2.42e3
  • 3.64e3
88.85
  • 88.85
  • 83.18
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.48e3
  • 2.48e3
  • 5.39e3
  • 7.36e3
88.58
  • 88.58
  • 75.11
  • 66.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.79e3
  • 2.79e3
  • 4.13e3
  • 7.25e3
87.13
  • 87.13
  • 80.95
  • 66.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.88e3
  • 2.88e3
86.71
  • 86.71
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
3.28e3
  • 3.28e3
84.87
  • 84.87
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.32e3
  • 3.32e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.04e3
  • 4.04e3
  • 4.19e3
  • 6.08e3
81.33
  • 81.33
  • 80.66
  • 71.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
4.14e3
  • 4.14e3
  • 5.77e3
  • 6.90e3
80.91
  • 80.91
  • 73.38
  • 68.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.32e3
  • 4.32e3
  • 4.37e3
80.05
  • 80.05
  • 79.85
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.58e3
  • 4.58e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.77e3
  • 4.77e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
5.20e3
  • 5.20e3
  • 6.06e3
76.01
  • 76.01
  • 72.04
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.32e3
  • 5.32e3
75.46
  • 75.46
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.69e3
  • 5.69e3
73.75
  • 73.75
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.71e3
  • 5.71e3
73.63
  • 73.63
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
6.12e3
  • 6.12e3
71.77
  • 71.77
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.21e3
  • 6.21e3
71.32
  • 71.32
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.44e3
  • 6.44e3
70.26
  • 70.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.83e3
  • 6.83e3
  • 8.10e3
  • 8.24e3
68.47
  • 68.47
  • 62.63
  • 61.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.76e3
  • 9.76e3
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.11e4
53.73
  • 53.73
  • 48.59
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species13 genesCompare expression
Mammalia13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species19 genesCompare expression
Bilateria24 species26 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003221.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000003221.

Cross-references

EnsemblENSMODG00000003221 (CHORDC1)
HGNCHGNC:14525 (CHORDC1)
Uniprot/SPTREMBLF6TYU3, F6TYU3_MONDO

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