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M. domestica Gene: HPGD - ENSMODG00000003626 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003626
NameHPGD
Descriptionhydroxyprostaglandin dehydrogenase 15-(NAD) [Source:HGNC Symbol;Acc:HGNC:5154]
OrganismMonodelphis domestica (opossum)
Synonym(s)sdr36c1
Orthologs(s)18 orthologs
Paralog(s)13 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
190
  • 190
  • 196
99.13
  • 99.13
  • 99.10
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
471
  • 471
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
969
  • 969
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.06e3
  • 1.06e3
  • 1.09e3
95.12
  • 95.12
  • 94.95
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.20e3
  • 1.20e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.24e3
  • 1.24e3
  • 1.32e3
94.28
  • 94.28
  • 93.93
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.66e3
  • 1.66e3
  • 4.94e3
  • 5.27e3
92.35
  • 92.35
  • 77.20
  • 75.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.19e3
  • 3.19e3
  • 4.96e3
  • 5.50e3
85.29
  • 85.29
  • 77.09
  • 74.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
4.15e3
  • 4.15e3
80.83
  • 80.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.96e3
  • 4.96e3
  • 6.40e3
  • 1.13e4
77.09
  • 77.09
  • 70.43
  • 47.82
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.47e3
  • 5.47e3
74.73
  • 74.73
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.87e3
  • 6.87e3
68.29
  • 68.29
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.39e3
  • 7.39e3
65.87
  • 65.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
  • 9.84e3
  • 1.05e4
65.31
  • 65.31
  • 54.59
  • 51.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
7.83e3
  • 7.83e3
  • 9.75e3
63.85
  • 63.85
  • 54.99
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.26e3
  • 8.26e3
61.87
  • 61.87
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.33e3
  • 8.33e3
61.56
  • 61.56
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.83e3
  • 8.83e3
59.22
  • 59.22
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.07e4
53.24
  • 53.24
  • 51.51
  • 50.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
51.64
  • 51.64
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
49.77
  • 49.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003626.

Paralogs (same species)

Cross-references

EnsemblENSMODG00000003626 (HPGD)
HGNCHGNC:5154 (HPGD)
Uniprot/SPTREMBLF7BMU4, F7BMU4_MONDO

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