M. domestica Gene: C20orf196 - ENSMODG00000003742 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003742
NameC20orf196
Descriptionchromosome 20 open reading frame 196 [Source:HGNC Symbol;Acc:HGNC:26318]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj25067

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
2.69e3
  • 2.69e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.02e3
  • 3.02e3
  • 3.47e3
  • 3.80e3
86.05
  • 86.05
  • 83.97
  • 82.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.99e3
  • 3.99e3
81.59
  • 81.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.02e3
  • 5.02e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.14e3
  • 5.14e3
76.28
  • 76.28
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.78e3
  • 5.78e3
  • 7.01e3
73.32
  • 73.32
  • 67.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.86e3
  • 5.86e3
  • 7.51e3
  • 8.56e3
72.96
  • 72.96
  • 65.31
  • 60.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.97e3
  • 5.97e3
  • 6.82e3
  • 9.35e3
72.46
  • 72.46
  • 68.52
  • 56.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.43e3
  • 6.43e3
  • 8.07e3
  • 9.65e3
70.34
  • 70.34
  • 62.77
  • 55.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.50e3
  • 6.50e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.53e3
  • 6.53e3
  • 8.51e3
69.87
  • 69.87
  • 60.73
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.83e3
  • 6.83e3
68.48
  • 68.48
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.90e3
  • 6.90e3
68.15
  • 68.15
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.91e3
  • 6.91e3
  • 7.01e3
68.12
  • 68.12
  • 67.62
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.98e3
  • 6.98e3
67.77
  • 67.77
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.31e3
  • 7.31e3
  • 9.47e3
66.24
  • 66.24
  • 56.31
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
  • 9.94e3
  • 1.07e4
64.79
  • 64.79
  • 54.11
  • 50.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
7.67e3
  • 7.67e3
64.58
  • 64.58
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.34e3
  • 8.34e3
61.49
  • 61.49
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.73e3
  • 8.73e3
59.72
  • 59.72
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.01e3
  • 9.01e3
58.39
  • 58.39
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.11e3
  • 9.11e3
57.93
  • 57.93
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
51.53
  • 51.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000003742 (C20orf196)
HGNCHGNC:26318 (C20orf196)
Uniprot/SPTREMBLF7ECV1, F7ECV1_MONDO

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