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M. domestica Gene: VSIG2 - ENSMODG00000003791 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003791
NameVSIG2
DescriptionV-set and immunoglobulin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17149]
OrganismMonodelphis domestica (opossum)
Synonym(s)cth, ctxl
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
744
  • 744
  • 1.65e3
  • 1.46e4
96.57
  • 96.57
  • 92.39
  • 32.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.38e3
  • 3.38e3
84.39
  • 84.39
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
5.87e3
  • 5.87e3
  • 1.30e4
72.92
  • 72.92
  • 40.13
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.47e3
  • 6.47e3
  • 6.73e3
  • 9.31e3
70.11
  • 70.11
  • 68.95
  • 57.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.92e3
  • 9.92e3
  • 1.18e4
54.19
  • 54.19
  • 45.52
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.12e4
  • 1.34e4
51.98
  • 51.98
  • 48.46
  • 38.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.18
  • 50.18
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
  • 1.12e4
49.68
  • 49.68
  • 48.34
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
42.91
  • 42.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.34e4
  • 1.36e4
42.69
  • 42.69
  • 38.03
  • 37.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
42.48
  • 42.48
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
  • 1.36e4
40.39
  • 40.39
  • 37.07
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.37e4
  • 1.37e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
35.87
  • 35.87
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.41e4
  • 1.41e4
34.89
  • 34.89
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
24.39
  • 24.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003791.

Cross-references

EnsemblENSMODG00000003791 (VSIG2)
HGNCHGNC:17149 (VSIG2)
Uniprot/SPTREMBLF7AA21, F7AA21_MONDO

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