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M. domestica Gene: RAB11B - ENSMODG00000003841 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003841
NameRAB11B
DescriptionRAB11B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9761]
OrganismMonodelphis domestica (opossum)
Synonym(s)h-ypt3
Orthologs(s)17 orthologs
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
469
  • 469
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
505
  • 505
  • 536
  • 767
97.67
  • 97.67
  • 97.53
  • 96.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
681
  • 681
  • 1.56e3
96.86
  • 96.86
  • 92.80
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
684
  • 684
  • 710
96.85
  • 96.85
  • 96.72
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
726
  • 726
  • 824
  • 999
96.65
  • 96.65
  • 96.20
  • 95.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
748
  • 748
96.55
  • 96.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
773
  • 773
  • 873
  • 962
96.44
  • 96.44
  • 95.97
  • 95.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
781
  • 781
96.40
  • 96.40
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
788
  • 788
  • 1.08e3
96.37
  • 96.37
  • 95.02
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
834
  • 834
  • 966
  • 981
96.15
  • 96.15
  • 95.54
  • 95.48
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
872
  • 872
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
873
  • 873
95.97
  • 95.97
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
940
  • 940
95.67
  • 95.67
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
949
  • 949
  • 1.10e3
95.62
  • 95.62
  • 94.91
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.04e3
  • 1.04e3
95.22
  • 95.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.21e3
  • 1.21e3
  • 1.45e3
  • 1.94e3
94.43
  • 94.43
  • 93.30
  • 91.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.51e3
  • 1.51e3
93.05
  • 93.05
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.54e3
  • 1.54e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.69e3
  • 1.69e3
92.22
  • 92.22
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.75e3
  • 1.75e3
91.94
  • 91.94
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.20e3
  • 3.20e3
85.24
  • 85.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria7 species7 genesCompare expression
Amniota8 species8 genesCompare expression
Tetrapoda9 species9 genesCompare expression
Bilateria16 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003841.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Opisthokonta12 genesCompare expression
Eukaryota64 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000003841.

Cross-references

EnsemblENSMODG00000003841 (RAB11B)
HGNCHGNC:9761 (RAB11B)
Uniprot/SPTREMBLF7EBP6, F7EBP6_MONDO

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