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M. domestica Gene: CPT1A - ENSMODG00000003995 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000003995
NameCPT1A
Descriptioncarnitine palmitoyltransferase 1A (liver) [Source:HGNC Symbol;Acc:HGNC:2328]
OrganismMonodelphis domestica (opossum)
Synonym(s)cpt1, cpt1-l, l-cpt1
Orthologs(s)25 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
442
  • 442
  • 509
97.96
  • 97.96
  • 97.65
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
655
  • 655
  • 953
  • 1.83e3
96.98
  • 96.98
  • 95.60
  • 91.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
729
  • 729
  • 1.46e3
  • 1.72e3
96.64
  • 96.64
  • 93.26
  • 92.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
  • 1.94e3
  • 2.62e3
93.43
  • 93.43
  • 91.03
  • 87.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
92.47
  • 92.47
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.72e3
  • 1.72e3
92.08
  • 92.08
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.94e3
  • 1.94e3
  • 5.98e3
91.07
  • 91.07
  • 72.39
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.01e3
  • 3.01e3
86.13
  • 86.13
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.04e3
  • 3.04e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.07e3
  • 3.07e3
85.85
  • 85.85
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.18e3
  • 3.18e3
85.33
  • 85.33
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
3.20e3
  • 3.20e3
85.22
  • 85.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.04e3
  • 4.04e3
  • 4.59e3
  • 5.45e3
81.33
  • 81.33
  • 78.84
  • 74.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.20e3
  • 4.20e3
80.61
  • 80.61
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.60e3
  • 4.60e3
  • 4.61e3
78.76
  • 78.76
  • 78.70
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
5.04e3
  • 5.04e3
  • 7.15e3
76.75
  • 76.75
  • 67.01
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.14e3
  • 5.14e3
76.26
  • 76.26
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
5.39e3
  • 5.39e3
  • 5.79e3
  • 5.98e3
75.13
  • 75.13
  • 73.28
  • 72.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.17e3
  • 7.17e3
66.89
  • 66.89
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.44e3
  • 7.44e3
65.65
  • 65.65
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.00e4
  • 1.00e4
53.86
  • 53.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000003995.

Paralogs (same species)

Paralogy information comes from OMA : ENSMODG00000003995.

Cross-references

EnsemblENSMODG00000003995 (CPT1A)
HGNCHGNC:2328 (CPT1A)
Uniprot/SPTREMBLF7DRY9, F7DRY9_MONDO

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