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M. domestica Gene: EXT1 - ENSMODG00000004092 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004092
NameEXT1
Descriptionexostosin glycosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:3512]
OrganismMonodelphis domestica (opossum)
Synonym(s)lgcr, lgs, ttv
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.57e3
  • 2.57e3
  • 3.90e3
  • 5.78e3
88.13
  • 88.13
  • 82.00
  • 73.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.82e3
  • 2.82e3
86.97
  • 86.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
  • 3.57e3
  • 4.02e3
86.16
  • 86.16
  • 83.53
  • 81.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.18e3
  • 3.18e3
85.32
  • 85.32
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.62e3
  • 3.62e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
4.19e3
  • 4.19e3
  • 5.37e3
80.67
  • 80.67
  • 75.23
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.39e3
  • 4.39e3
79.73
  • 79.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.52e3
  • 4.52e3
  • 5.16e3
  • 5.51e3
79.12
  • 79.12
  • 76.20
  • 74.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.56e3
  • 4.56e3
  • 5.86e3
78.97
  • 78.97
  • 72.95
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.79e3
  • 4.79e3
77.90
  • 77.90
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.97e3
  • 4.97e3
77.05
  • 77.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.22e3
  • 5.22e3
  • 6.03e3
75.90
  • 75.90
  • 72.16
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.45e3
  • 5.45e3
  • 5.99e3
74.85
  • 74.85
  • 72.34
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.70e3
  • 5.70e3
73.68
  • 73.68
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.23e3
  • 6.23e3
  • 6.71e3
  • 6.71e3
71.25
  • 71.25
  • 69.03
  • 69.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
63.69
  • 63.69
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
57.26
  • 57.26
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
52.36
  • 52.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
  • 1.06e4
  • 1.20e4
51.90
  • 51.90
  • 51.04
  • 44.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
47.18
  • 47.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria10 species10 genesCompare expression
Amniota11 species11 genesCompare expression
Tetrapoda12 species12 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004092.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000004092.

Cross-references

EnsemblENSMODG00000004092 (EXT1)
HGNCHGNC:3512 (EXT1)
Uniprot/SPTREMBLF6VVP6, F6VVP6_MONDO

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