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M. domestica Gene: EED - ENSMODG00000004253 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004253
NameEED
Descriptionembryonic ectoderm development [Source:HGNC Symbol;Acc:HGNC:3188]
OrganismMonodelphis domestica (opossum)
Synonym(s)heed, wait-1
Orthologs(s)27 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.96e3
  • 1.96e3
90.93
  • 90.93
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.46e3
  • 2.46e3
88.64
  • 88.64
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.75e3
  • 3.75e3
  • 4.67e3
82.69
  • 82.69
  • 78.43
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.64e3
  • 4.64e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.91e3
  • 4.91e3
77.36
  • 77.36
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.13e3
  • 5.13e3
76.33
  • 76.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.40e3
  • 5.40e3
  • 5.69e3
  • 7.55e3
75.06
  • 75.06
  • 73.72
  • 65.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.64e3
  • 5.64e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.72e3
  • 5.72e3
  • 7.17e3
  • 8.23e3
73.60
  • 73.60
  • 66.91
  • 62.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.74e3
  • 5.74e3
  • 7.09e3
  • 7.76e3
73.50
  • 73.50
  • 67.25
  • 64.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.35e3
  • 6.35e3
70.68
  • 70.68
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.49e3
  • 6.49e3
  • 8.08e3
  • 8.26e3
70.05
  • 70.05
  • 62.71
  • 61.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
6.77e3
  • 6.77e3
68.75
  • 68.75
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.18e3
  • 7.18e3
66.84
  • 66.84
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.34e3
  • 7.34e3
  • 7.92e3
66.13
  • 66.13
  • 63.42
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.43e3
  • 7.43e3
65.71
  • 65.71
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.73e3
  • 7.73e3
64.34
  • 64.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.76e3
  • 7.76e3
  • 8.14e3
  • 9.65e3
64.19
  • 64.19
  • 62.40
  • 55.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.81e3
  • 7.81e3
  • 7.95e3
63.93
  • 63.93
  • 63.28
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.85e3
  • 7.85e3
63.77
  • 63.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.41e3
  • 9.41e3
  • 9.61e3
56.55
  • 56.55
  • 55.65
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004253.

Cross-references

EnsemblENSMODG00000004253 (EED)
HGNCHGNC:3188 (EED)
Uniprot/SPTREMBLF6TW64, F6TW64_MONDO

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