M. domestica Gene: AGAP3 - ENSMODG00000004345 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004345
NameAGAP3
DescriptionArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:HGNC:16923]
OrganismMonodelphis domestica (opossum)
Synonym(s)centg3
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.41e3
  • 1.41e3
93.48
  • 93.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
2.55e3
  • 2.55e3
  • 2.58e3
  • 6.98e3
88.22
  • 88.22
  • 88.12
  • 67.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.29e3
  • 3.29e3
  • 4.52e3
84.81
  • 84.81
  • 79.13
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
81.68
  • 81.68
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.00e3
  • 5.00e3
76.91
  • 76.91
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.07e3
  • 5.07e3
  • 7.33e3
  • 8.56e3
76.62
  • 76.62
  • 66.17
  • 60.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.28e3
  • 5.28e3
75.61
  • 75.61
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.52e3
  • 5.52e3
74.53
  • 74.53
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.62e3
  • 5.62e3
  • 6.19e3
  • 7.26e3
74.04
  • 74.04
  • 71.41
  • 66.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.09e3
  • 6.09e3
  • 6.79e3
  • 6.96e3
71.87
  • 71.87
  • 68.67
  • 67.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.35e3
  • 6.35e3
  • 7.80e3
70.67
  • 70.67
  • 63.99
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.73e3
  • 6.73e3
68.95
  • 68.95
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
67.24
  • 67.24
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.23e3
  • 7.23e3
66.64
  • 66.64
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.45e3
  • 7.45e3
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.48e3
  • 7.48e3
  • 9.56e3
65.46
  • 65.46
  • 55.89
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.30e3
  • 8.30e3
  • 8.64e3
  • 1.03e4
61.68
  • 61.68
  • 60.13
  • 52.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.33e3
  • 8.33e3
61.54
  • 61.54
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.50e3
  • 9.50e3
  • 9.95e3
56.17
  • 56.17
  • 54.08
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.39
  • 52.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004345.

Cross-references

EnsemblENSMODG00000004345 (AGAP3)
HGNCHGNC:16923 (AGAP3)
Uniprot/SPTREMBLF6X5Q7, F6X5Q7_MONDO

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