M. domestica Gene: GBX1 - ENSMODG00000004356 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004356
NameGBX1
Descriptiongastrulation brain homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4185]
OrganismMonodelphis domestica (opossum)
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
9.61e3
  • 9.61e3
  • 1.45e4
55.64
  • 55.64
  • 33.28
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.22e4
  • 1.25e4
53.70
  • 53.70
  • 43.53
  • 42.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.77e4
42.25
  • 42.25
  • 18.20
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.44e4
40.60
  • 40.60
  • 33.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
35.20
  • 35.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
32.47
  • 32.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
  • 1.71e4
31.36
  • 31.36
  • 21.07
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.54e4
  • 1.54e4
28.78
  • 28.78
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
20.73
  • 20.73
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.75e4
  • 1.75e4
19.02
  • 19.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria10 species10 genesCompare expression
Amniota11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004356.

Cross-references

EnsemblENSMODG00000004356 (GBX1)
HGNCHGNC:4185 (GBX1)
Uniprot/SPTREMBLF6T3S9, F6T3S9_MONDO

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