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M. domestica Gene: ITGB1BP2 - ENSMODG00000004464 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004464
NameITGB1BP2
Descriptionintegrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
OrganismMonodelphis domestica (opossum)
Synonym(s)chordc3
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.21e3
  • 1.21e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.62e3
  • 2.62e3
  • 2.70e3
  • 3.12e3
87.90
  • 87.90
  • 87.52
  • 85.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.29e3
  • 7.29e3
  • 8.68e3
66.34
  • 66.34
  • 59.95
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
  • 1.32e4
  • 1.33e4
65.77
  • 65.77
  • 39.18
  • 38.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.82e3
  • 7.82e3
63.88
  • 63.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.09e3
  • 8.09e3
  • 9.40e3
  • 9.62e3
62.67
  • 62.67
  • 56.62
  • 55.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.19e3
  • 8.19e3
62.21
  • 62.21
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.50e3
  • 8.50e3
60.75
  • 60.75
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.60e3
  • 8.60e3
60.28
  • 60.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.88e3
  • 9.88e3
54.40
  • 54.40
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.17e4
  • 1.24e4
53.35
  • 53.35
  • 45.79
  • 42.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
52.20
  • 52.20
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
47.49
  • 47.49
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.14e4
  • 1.14e4
  • 1.19e4
47.29
  • 47.29
  • 45.09
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.31e4
43.51
  • 43.51
  • 39.55
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.33e4
40.94
  • 40.94
  • 38.41
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
40.91
  • 40.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.50e4
  • 1.55e4
36.63
  • 36.63
  • 30.73
  • 28.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.39e4
  • 1.39e4
36.04
  • 36.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004464.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000004464.

Cross-references

EnsemblENSMODG00000004464 (ITGB1BP2)
HGNCHGNC:6154 (ITGB1BP2)
Uniprot/SPTREMBLF6R6I4, F6R6I4_MONDO

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