M. domestica Gene: ANKRD42 - ENSMODG00000004477 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004477
NameANKRD42
Descriptionankyrin repeat domain 42 [Source:HGNC Symbol;Acc:HGNC:26752]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj37874, ppp1r79, sarp
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.04e3
  • 5.04e3
  • 6.02e3
  • 6.67e3
76.73
  • 76.73
  • 72.22
  • 69.22
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.28e3
  • 5.28e3
75.62
  • 75.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
  • 7.76e3
  • 1.07e4
75.41
  • 75.41
  • 64.17
  • 50.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.60e3
  • 6.60e3
  • 9.86e3
69.51
  • 69.51
  • 54.47
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.84e3
  • 8.84e3
59.19
  • 59.19
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
53.00
  • 53.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
49.59
  • 49.59
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.36e4
44.16
  • 44.16
  • 37.39
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
  • 1.32e4
43.12
  • 43.12
  • 39.16
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.24e4
  • 1.24e4
  • 1.41e4
42.75
  • 42.75
  • 34.73
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
41.53
  • 41.53
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
37.69
  • 37.69
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.36e4
  • 1.36e4
37.01
  • 37.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.48e4
32.90
  • 32.90
  • 31.67
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
  • 1.53e4
  • 1.63e4
30.59
  • 30.59
  • 29.34
  • 24.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
29.64
  • 29.64
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
29.43
  • 29.43
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.55e4
  • 1.55e4
28.42
  • 28.42
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
27.97
  • 27.97
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.61e4
  • 1.61e4
25.88
  • 25.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004477.

Cross-references

EnsemblENSMODG00000004477 (ANKRD42)
HGNCHGNC:26752 (ANKRD42)
Uniprot/SPTREMBLF6VRI7, F6VRI7_MONDO

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