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M. domestica Gene: - ENSMODG00000004487 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004487
Name-
DescriptionUncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6VR40]
OrganismMonodelphis domestica (opossum)
Orthologs(s)13 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
168
  • 168
  • 227
99.23
  • 99.23
  • 98.96
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
181
  • 181
99.17
  • 99.17
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
363
  • 363
  • 528
98.33
  • 98.33
  • 97.57
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
469
  • 469
  • 5.57e3
  • 1.31e4
97.84
  • 97.84
  • 74.27
  • 39.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
470
  • 470
  • 559
  • 1.40e4
97.83
  • 97.83
  • 97.42
  • 35.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
531
  • 531
97.55
  • 97.55
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
939
  • 939
95.67
  • 95.67
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
91.20
  • 91.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
90.77
  • 90.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
5.17e3
  • 5.17e3
  • 9.20e3
  • 1.35e4
76.14
  • 76.14
  • 57.51
  • 37.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.37e3
  • 6.37e3
70.59
  • 70.59
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.43e3
  • 8.43e3
61.07
  • 61.07
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.95e3
  • 8.95e3
  • 1.40e4
58.70
  • 58.70
  • 35.31
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.02e4
  • 1.02e4
52.93
  • 52.93
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
52.11
  • 52.11
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 2.14e4
  • 2.16e4
47.18
  • 47.18
  • 1.27
  • 0.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
44.05
  • 44.05
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
32.58
  • 32.58
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
16.99
  • 16.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Euteleostomi13 species13 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004487.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metatheria1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000004487.

Cross-references

EnsemblENSMODG00000004487
Uniprot/SPTREMBLF6VR40, F6VR40_MONDO

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