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M. domestica Gene: BHLHE40 - ENSMODG00000004516 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004516
NameBHLHE40
Descriptionbasic helix-loop-helix family member e40 [Source:HGNC Symbol;Acc:HGNC:1046]
OrganismMonodelphis domestica (opossum)
Synonym(s)bhlhb2, bhlhe40, dec1, stra13
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.85e3
  • 1.85e3
  • 3.21e3
91.46
  • 91.46
  • 85.17
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.49e3
  • 2.49e3
  • 2.53e3
  • 4.83e3
88.50
  • 88.50
  • 88.32
  • 77.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.66e3
  • 2.66e3
  • 3.98e3
  • 1.14e4
87.71
  • 87.71
  • 81.63
  • 47.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
3.08e3
  • 3.08e3
  • 5.63e3
85.78
  • 85.78
  • 74.00
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.61e3
  • 3.61e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.79e3
  • 3.79e3
  • 4.00e3
  • 4.78e3
82.49
  • 82.49
  • 81.54
  • 77.92
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.07e3
  • 4.07e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.14e3
  • 4.14e3
80.89
  • 80.89
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.58e3
  • 4.58e3
78.87
  • 78.87
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.38e3
  • 5.38e3
75.16
  • 75.16
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.67e3
  • 5.67e3
73.82
  • 73.82
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.75e3
  • 5.75e3
73.46
  • 73.46
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.56e3
  • 6.56e3
  • 9.40e3
69.70
  • 69.70
  • 56.61
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.09e3
  • 7.09e3
  • 8.35e3
  • 9.75e3
67.26
  • 67.26
  • 61.45
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.45e3
  • 7.45e3
  • 9.12e3
65.60
  • 65.60
  • 57.92
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.99e3
  • 8.99e3
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
  • 9.44e3
  • 1.01e4
57.81
  • 57.81
  • 56.44
  • 53.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
52.84
  • 52.84
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.56
  • 52.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004516.

Cross-references

EnsemblENSMODG00000004516 (BHLHE40)
HGNCHGNC:1046 (BHLHE40)
Uniprot/SPTREMBLF6UR97, F6UR97_MONDO

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