M. domestica Gene: GADD45B - ENSMODG00000004843 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000004843
NameGADD45B
Descriptiongrowth arrest and DNA damage inducible beta [Source:HGNC Symbol;Acc:HGNC:4096]
OrganismMonodelphis domestica (opossum)
Synonym(s)dkfzp566b133, gadd45beta, myd118
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.95e3
  • 1.95e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
90.53
  • 90.53
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
  • 6.02e3
90.23
  • 90.23
  • 72.20
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 3.05e3
  • 4.33e3
89.85
  • 89.85
  • 85.93
  • 80.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.51e3
  • 2.51e3
  • 2.54e3
  • 5.68e3
88.42
  • 88.42
  • 88.27
  • 73.76
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.98e3
  • 2.98e3
86.25
  • 86.25
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.40e3
  • 3.40e3
84.30
  • 84.30
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.74e3
  • 3.74e3
82.75
  • 82.75
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.14e3
  • 5.14e3
76.26
  • 76.26
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.27e3
  • 5.27e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.56e3
  • 5.56e3
74.33
  • 74.33
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.65e3
  • 5.65e3
73.94
  • 73.94
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.89e3
  • 5.89e3
72.81
  • 72.81
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.18e3
  • 6.18e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.74e3
  • 6.74e3
  • 8.14e3
  • 9.87e3
68.89
  • 68.89
  • 62.44
  • 54.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.84e3
  • 6.84e3
  • 1.17e4
68.43
  • 68.43
  • 45.96
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
7.07e3
  • 7.07e3
  • 8.03e3
  • 8.40e3
67.37
  • 67.37
  • 62.92
  • 61.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.56e3
  • 7.56e3
65.09
  • 65.09
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.45e3
  • 8.45e3
  • 9.16e3
60.99
  • 60.99
  • 57.70
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.53e3
  • 8.53e3
  • 9.45e3
60.62
  • 60.62
  • 56.37
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
  • 1.14e4
  • 1.19e4
50.46
  • 50.46
  • 47.27
  • 45.13
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000004843.

Cross-references

EnsemblENSMODG00000004843 (GADD45B)
HGNCHGNC:4096 (GADD45B)
Uniprot/SPTREMBLF6U5E4, F6U5E4_MONDO

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