M. domestica Gene: CLEC16A - ENSMODG00000005166 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000005166
NameCLEC16A
DescriptionC-type lectin domain family 16 member A [Source:HGNC Symbol;Acc:HGNC:29013]
OrganismMonodelphis domestica (opossum)
Synonym(s)gop-1, kiaa0350
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.82e3
  • 2.82e3
87.00
  • 87.00
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
3.66e3
  • 3.66e3
  • 4.07e3
  • 8.30e3
83.09
  • 83.09
  • 81.20
  • 61.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.13e3
  • 4.13e3
  • 4.24e3
  • 4.61e3
80.94
  • 80.94
  • 80.45
  • 78.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.80e3
  • 4.80e3
77.86
  • 77.86
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
5.38e3
  • 5.38e3
  • 6.51e3
75.16
  • 75.16
  • 69.96
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.53e3
  • 5.53e3
  • 6.03e3
  • 6.47e3
74.49
  • 74.49
  • 72.16
  • 70.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
6.40e3
  • 6.40e3
70.48
  • 70.48
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.62e3
  • 6.62e3
  • 7.16e3
69.43
  • 69.43
  • 66.93
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.08e3
  • 7.08e3
67.30
  • 67.30
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.32e3
  • 7.32e3
  • 7.40e3
66.23
  • 66.23
  • 65.83
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.34e3
  • 7.34e3
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.64e3
  • 7.64e3
64.71
  • 64.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.88e3
  • 7.88e3
63.61
  • 63.61
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.92e3
  • 7.92e3
63.42
  • 63.42
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.99e3
  • 7.99e3
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.02e3
  • 8.02e3
  • 8.18e3
62.98
  • 62.98
  • 62.22
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.16e3
  • 8.16e3
  • 8.89e3
  • 9.03e3
62.34
  • 62.34
  • 58.97
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.95e3
  • 8.95e3
58.66
  • 58.66
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
9.39e3
  • 9.39e3
56.67
  • 56.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.43e3
  • 9.43e3
  • 9.46e3
  • 9.49e3
56.47
  • 56.47
  • 56.31
  • 56.18
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000005166.

Cross-references

EnsemblENSMODG00000005166 (CLEC16A)
HGNCHGNC:29013 (CLEC16A)
Uniprot/SPTREMBLF7E7Y3, F7E7Y3_MONDO

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